mirror of
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* Add Google APIs typings * [gapi.cliebt.* ] Add version as part of typings name and fix gapi.client tslint errors * versions should not get their own folders fixing a few typos using /** syntax so comments show up in editors export only actual (last) version for now * export only actual (last) version for now * merge namespaces and remove unnecessary namespace qualifiers * remove namespace qualifier for gapi.client.Request from nested namespaces and change Request base interface to Promise * disable await-promise rule * fix collision between gapi.client.Request and Request from nested namespace disable no-irregular-whitespace rule * sort properties and namespace resources * remove empty comments sort resources amd methods in tests and readme.md * update 'this is autogenerated file' banner to remove this text from gapi.client namespace hint use multiline comments when comment has several lines * implement no-trailing-whitespace, no-padding, max-line-length, await-promise, no-irregular-whitespace rules * add strictFunctionTypes to tsconfig * fix "Whitespace within parentheses is not allowed" rule * fix ts-lint rules * fixes * remove deprecated replicapool and replicapoolupdater api * fix no-irregular-whitespace * fix no-irregular-whitespace
751 lines
30 KiB
TypeScript
751 lines
30 KiB
TypeScript
/* This is stub file for gapi.client.{{=it.name}} definition tests */
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/* IMPORTANT.
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* This file was automatically generated by https://github.com/Bolisov/google-api-typings-generator. Please do not edit it manually.
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* In case of any problems please post issue to https://github.com/Bolisov/google-api-typings-generator
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**/
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gapi.load('client', () => {
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/** now we can use gapi.client */
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gapi.client.load('genomics', 'v1', () => {
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/** now we can use gapi.client.genomics */
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/** don't forget to authenticate your client before sending any request to resources: */
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/** declare client_id registered in Google Developers Console */
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const client_id = '<<PUT YOUR CLIENT ID HERE>>';
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const scope = [
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/** View and manage your data in Google BigQuery */
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'https://www.googleapis.com/auth/bigquery',
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/** View and manage your data across Google Cloud Platform services */
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'https://www.googleapis.com/auth/cloud-platform',
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/** Manage your data in Google Cloud Storage */
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'https://www.googleapis.com/auth/devstorage.read_write',
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/** View and manage Genomics data */
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'https://www.googleapis.com/auth/genomics',
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/** View Genomics data */
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'https://www.googleapis.com/auth/genomics.readonly',
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];
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const immediate = true;
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gapi.auth.authorize({ client_id, scope, immediate }, authResult => {
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if (authResult && !authResult.error) {
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/** handle succesfull authorization */
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run();
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} else {
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/** handle authorization error */
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}
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});
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run();
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});
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async function run() {
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/**
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* Creates one or more new annotations atomically. All annotations must
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* belong to the same annotation set. Caller must have WRITE
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* permission for this annotation set. For optimal performance, batch
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* positionally adjacent annotations together.
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*
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* If the request has a systemic issue, such as an attempt to write to
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* an inaccessible annotation set, the entire RPC will fail accordingly. For
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* lesser data issues, when possible an error will be isolated to the
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* corresponding batch entry in the response; the remaining well formed
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* annotations will be created normally.
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*
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* For details on the requirements for each individual annotation resource,
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* see
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* CreateAnnotation.
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*/
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await gapi.client.annotations.batchCreate({
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});
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/**
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* Creates a new annotation. Caller must have WRITE permission
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* for the associated annotation set.
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*
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* The following fields are required:
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*
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* * annotationSetId
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* * referenceName or
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* referenceId
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*
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* ### Transcripts
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*
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* For annotations of type TRANSCRIPT, the following fields of
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* transcript must be provided:
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*
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* * exons.start
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* * exons.end
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*
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* All other fields may be optionally specified, unless documented as being
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* server-generated (for example, the `id` field). The annotated
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* range must be no longer than 100Mbp (mega base pairs). See the
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* Annotation resource
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* for additional restrictions on each field.
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*/
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await gapi.client.annotations.create({
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});
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/**
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* Deletes an annotation. Caller must have WRITE permission for
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* the associated annotation set.
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*/
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await gapi.client.annotations.delete({
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annotationId: "annotationId",
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});
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/**
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* Gets an annotation. Caller must have READ permission
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* for the associated annotation set.
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*/
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await gapi.client.annotations.get({
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annotationId: "annotationId",
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});
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/**
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* Searches for annotations that match the given criteria. Results are
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* ordered by genomic coordinate (by reference sequence, then position).
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* Annotations with equivalent genomic coordinates are returned in an
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* unspecified order. This order is consistent, such that two queries for the
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* same content (regardless of page size) yield annotations in the same order
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* across their respective streams of paginated responses. Caller must have
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* READ permission for the queried annotation sets.
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*/
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await gapi.client.annotations.search({
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});
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/**
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* Updates an annotation. Caller must have
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* WRITE permission for the associated dataset.
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*/
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await gapi.client.annotations.update({
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annotationId: "annotationId",
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updateMask: "updateMask",
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});
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/**
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* Creates a new annotation set. Caller must have WRITE permission for the
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* associated dataset.
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*
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* The following fields are required:
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*
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* * datasetId
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* * referenceSetId
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*
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* All other fields may be optionally specified, unless documented as being
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* server-generated (for example, the `id` field).
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*/
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await gapi.client.annotationsets.create({
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});
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/**
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* Deletes an annotation set. Caller must have WRITE permission
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* for the associated annotation set.
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*/
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await gapi.client.annotationsets.delete({
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annotationSetId: "annotationSetId",
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});
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/**
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* Gets an annotation set. Caller must have READ permission for
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* the associated dataset.
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*/
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await gapi.client.annotationsets.get({
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annotationSetId: "annotationSetId",
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});
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/**
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* Searches for annotation sets that match the given criteria. Annotation sets
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* are returned in an unspecified order. This order is consistent, such that
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* two queries for the same content (regardless of page size) yield annotation
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* sets in the same order across their respective streams of paginated
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* responses. Caller must have READ permission for the queried datasets.
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*/
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await gapi.client.annotationsets.search({
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});
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/**
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* Updates an annotation set. The update must respect all mutability
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* restrictions and other invariants described on the annotation set resource.
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* Caller must have WRITE permission for the associated dataset.
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*/
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await gapi.client.annotationsets.update({
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annotationSetId: "annotationSetId",
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updateMask: "updateMask",
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});
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/**
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* Creates a new call set.
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*
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* For the definitions of call sets and other genomics resources, see
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* [Fundamentals of Google
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* Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
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*/
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await gapi.client.callsets.create({
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});
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/**
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* Deletes a call set.
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*
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* For the definitions of call sets and other genomics resources, see
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* [Fundamentals of Google
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* Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
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*/
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await gapi.client.callsets.delete({
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callSetId: "callSetId",
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});
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/**
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* Gets a call set by ID.
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*
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* For the definitions of call sets and other genomics resources, see
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* [Fundamentals of Google
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* Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
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*/
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await gapi.client.callsets.get({
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callSetId: "callSetId",
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});
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/**
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* Updates a call set.
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*
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* For the definitions of call sets and other genomics resources, see
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* [Fundamentals of Google
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* Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
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*
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* This method supports patch semantics.
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*/
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await gapi.client.callsets.patch({
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callSetId: "callSetId",
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updateMask: "updateMask",
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});
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/**
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* Gets a list of call sets matching the criteria.
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*
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* For the definitions of call sets and other genomics resources, see
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* [Fundamentals of Google
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* Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
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*
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* Implements
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* [GlobalAllianceApi.searchCallSets](https://github.com/ga4gh/schemas/blob/v0.5.1/src/main/resources/avro/variantmethods.avdl#L178).
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*/
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await gapi.client.callsets.search({
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});
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/**
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* Creates a new dataset.
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*
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* For the definitions of datasets and other genomics resources, see
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* [Fundamentals of Google
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* Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
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*/
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await gapi.client.datasets.create({
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});
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/**
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* Deletes a dataset and all of its contents (all read group sets,
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* reference sets, variant sets, call sets, annotation sets, etc.)
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* This is reversible (up to one week after the deletion) via
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* the
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* datasets.undelete
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* operation.
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*
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* For the definitions of datasets and other genomics resources, see
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* [Fundamentals of Google
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* Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
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*/
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await gapi.client.datasets.delete({
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datasetId: "datasetId",
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});
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/**
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* Gets a dataset by ID.
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*
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* For the definitions of datasets and other genomics resources, see
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* [Fundamentals of Google
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* Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
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*/
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await gapi.client.datasets.get({
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datasetId: "datasetId",
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});
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/**
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* Gets the access control policy for the dataset. This is empty if the
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* policy or resource does not exist.
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*
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* See <a href="/iam/docs/managing-policies#getting_a_policy">Getting a
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* Policy</a> for more information.
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*
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* For the definitions of datasets and other genomics resources, see
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* [Fundamentals of Google
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* Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
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*/
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await gapi.client.datasets.getIamPolicy({
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resource: "resource",
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});
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/**
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* Lists datasets within a project.
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*
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* For the definitions of datasets and other genomics resources, see
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* [Fundamentals of Google
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* Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
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*/
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await gapi.client.datasets.list({
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pageSize: 1,
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pageToken: "pageToken",
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projectId: "projectId",
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});
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/**
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* Updates a dataset.
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*
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* For the definitions of datasets and other genomics resources, see
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* [Fundamentals of Google
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* Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
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*
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* This method supports patch semantics.
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*/
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await gapi.client.datasets.patch({
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datasetId: "datasetId",
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updateMask: "updateMask",
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});
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/**
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* Sets the access control policy on the specified dataset. Replaces any
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* existing policy.
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*
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* For the definitions of datasets and other genomics resources, see
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* [Fundamentals of Google
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* Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
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*
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* See <a href="/iam/docs/managing-policies#setting_a_policy">Setting a
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* Policy</a> for more information.
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*/
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await gapi.client.datasets.setIamPolicy({
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resource: "resource",
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});
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/**
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* Returns permissions that a caller has on the specified resource.
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* See <a href="/iam/docs/managing-policies#testing_permissions">Testing
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* Permissions</a> for more information.
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*
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* For the definitions of datasets and other genomics resources, see
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* [Fundamentals of Google
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* Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
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*/
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await gapi.client.datasets.testIamPermissions({
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resource: "resource",
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});
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/**
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* Undeletes a dataset by restoring a dataset which was deleted via this API.
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*
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* For the definitions of datasets and other genomics resources, see
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* [Fundamentals of Google
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* Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
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*
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* This operation is only possible for a week after the deletion occurred.
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*/
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await gapi.client.datasets.undelete({
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datasetId: "datasetId",
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});
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/**
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* Starts asynchronous cancellation on a long-running operation. The server makes a best effort to cancel the operation, but success is not guaranteed.
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* Clients may use Operations.GetOperation or Operations.ListOperations to check whether the cancellation succeeded or the operation completed despite
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* cancellation.
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*/
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await gapi.client.operations.cancel({
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name: "name",
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});
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/**
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* Gets the latest state of a long-running operation. Clients can use this
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* method to poll the operation result at intervals as recommended by the API
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* service.
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*/
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await gapi.client.operations.get({
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name: "name",
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});
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/** Lists operations that match the specified filter in the request. */
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await gapi.client.operations.list({
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filter: "filter",
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name: "name",
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pageSize: 3,
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pageToken: "pageToken",
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});
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/**
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* Deletes a read group set.
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*
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* For the definitions of read group sets and other genomics resources, see
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* [Fundamentals of Google
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* Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
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*/
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await gapi.client.readgroupsets.delete({
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readGroupSetId: "readGroupSetId",
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});
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/**
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* Exports a read group set to a BAM file in Google Cloud Storage.
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*
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* For the definitions of read group sets and other genomics resources, see
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* [Fundamentals of Google
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* Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
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*
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* Note that currently there may be some differences between exported BAM
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* files and the original BAM file at the time of import. See
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* ImportReadGroupSets
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* for caveats.
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*/
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await gapi.client.readgroupsets.export({
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readGroupSetId: "readGroupSetId",
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});
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/**
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* Gets a read group set by ID.
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*
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* For the definitions of read group sets and other genomics resources, see
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* [Fundamentals of Google
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* Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
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*/
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await gapi.client.readgroupsets.get({
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readGroupSetId: "readGroupSetId",
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});
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/**
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* Creates read group sets by asynchronously importing the provided
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* information.
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*
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* For the definitions of read group sets and other genomics resources, see
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* [Fundamentals of Google
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* Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
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*
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* The caller must have WRITE permissions to the dataset.
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*
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* ## Notes on [BAM](https://samtools.github.io/hts-specs/SAMv1.pdf) import
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*
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* - Tags will be converted to strings - tag types are not preserved
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* - Comments (`@CO`) in the input file header will not be preserved
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* - Original header order of references (`@SQ`) will not be preserved
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* - Any reverse stranded unmapped reads will be reverse complemented, and
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* their qualities (also the "BQ" and "OQ" tags, if any) will be reversed
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* - Unmapped reads will be stripped of positional information (reference name
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* and position)
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*/
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await gapi.client.readgroupsets.import({
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});
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/**
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* Updates a read group set.
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*
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* For the definitions of read group sets and other genomics resources, see
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* [Fundamentals of Google
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* Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
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*
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* This method supports patch semantics.
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*/
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await gapi.client.readgroupsets.patch({
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readGroupSetId: "readGroupSetId",
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updateMask: "updateMask",
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});
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/**
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* Searches for read group sets matching the criteria.
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*
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* For the definitions of read group sets and other genomics resources, see
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* [Fundamentals of Google
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* Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
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*
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* Implements
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* [GlobalAllianceApi.searchReadGroupSets](https://github.com/ga4gh/schemas/blob/v0.5.1/src/main/resources/avro/readmethods.avdl#L135).
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*/
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await gapi.client.readgroupsets.search({
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});
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/**
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* Gets a list of reads for one or more read group sets.
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*
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* For the definitions of read group sets and other genomics resources, see
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* [Fundamentals of Google
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* Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
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*
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* Reads search operates over a genomic coordinate space of reference sequence
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* & position defined over the reference sequences to which the requested
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* read group sets are aligned.
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*
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* If a target positional range is specified, search returns all reads whose
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* alignment to the reference genome overlap the range. A query which
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* specifies only read group set IDs yields all reads in those read group
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* sets, including unmapped reads.
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*
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* All reads returned (including reads on subsequent pages) are ordered by
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* genomic coordinate (by reference sequence, then position). Reads with
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* equivalent genomic coordinates are returned in an unspecified order. This
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* order is consistent, such that two queries for the same content (regardless
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* of page size) yield reads in the same order across their respective streams
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* of paginated responses.
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*
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* Implements
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* [GlobalAllianceApi.searchReads](https://github.com/ga4gh/schemas/blob/v0.5.1/src/main/resources/avro/readmethods.avdl#L85).
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*/
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await gapi.client.reads.search({
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});
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/**
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* Gets a reference.
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*
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* For the definitions of references and other genomics resources, see
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* [Fundamentals of Google
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* Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
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*
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* Implements
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* [GlobalAllianceApi.getReference](https://github.com/ga4gh/schemas/blob/v0.5.1/src/main/resources/avro/referencemethods.avdl#L158).
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*/
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await gapi.client.references.get({
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referenceId: "referenceId",
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});
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/**
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|
* Searches for references which match the given criteria.
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*
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|
* For the definitions of references and other genomics resources, see
|
|
* [Fundamentals of Google
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|
* Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
|
|
*
|
|
* Implements
|
|
* [GlobalAllianceApi.searchReferences](https://github.com/ga4gh/schemas/blob/v0.5.1/src/main/resources/avro/referencemethods.avdl#L146).
|
|
*/
|
|
await gapi.client.references.search({
|
|
});
|
|
/**
|
|
* Gets a reference set.
|
|
*
|
|
* For the definitions of references and other genomics resources, see
|
|
* [Fundamentals of Google
|
|
* Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
|
|
*
|
|
* Implements
|
|
* [GlobalAllianceApi.getReferenceSet](https://github.com/ga4gh/schemas/blob/v0.5.1/src/main/resources/avro/referencemethods.avdl#L83).
|
|
*/
|
|
await gapi.client.referencesets.get({
|
|
referenceSetId: "referenceSetId",
|
|
});
|
|
/**
|
|
* Searches for reference sets which match the given criteria.
|
|
*
|
|
* For the definitions of references and other genomics resources, see
|
|
* [Fundamentals of Google
|
|
* Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
|
|
*
|
|
* Implements
|
|
* [GlobalAllianceApi.searchReferenceSets](https://github.com/ga4gh/schemas/blob/v0.5.1/src/main/resources/avro/referencemethods.avdl#L71)
|
|
*/
|
|
await gapi.client.referencesets.search({
|
|
});
|
|
/**
|
|
* Creates a new variant.
|
|
*
|
|
* For the definitions of variants and other genomics resources, see
|
|
* [Fundamentals of Google
|
|
* Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
|
|
*/
|
|
await gapi.client.variants.create({
|
|
});
|
|
/**
|
|
* Deletes a variant.
|
|
*
|
|
* For the definitions of variants and other genomics resources, see
|
|
* [Fundamentals of Google
|
|
* Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
|
|
*/
|
|
await gapi.client.variants.delete({
|
|
variantId: "variantId",
|
|
});
|
|
/**
|
|
* Gets a variant by ID.
|
|
*
|
|
* For the definitions of variants and other genomics resources, see
|
|
* [Fundamentals of Google
|
|
* Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
|
|
*/
|
|
await gapi.client.variants.get({
|
|
variantId: "variantId",
|
|
});
|
|
/**
|
|
* Creates variant data by asynchronously importing the provided information.
|
|
*
|
|
* For the definitions of variant sets and other genomics resources, see
|
|
* [Fundamentals of Google
|
|
* Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
|
|
*
|
|
* The variants for import will be merged with any existing variant that
|
|
* matches its reference sequence, start, end, reference bases, and
|
|
* alternative bases. If no such variant exists, a new one will be created.
|
|
*
|
|
* When variants are merged, the call information from the new variant
|
|
* is added to the existing variant, and Variant info fields are merged
|
|
* as specified in
|
|
* infoMergeConfig.
|
|
* As a special case, for single-sample VCF files, QUAL and FILTER fields will
|
|
* be moved to the call level; these are sometimes interpreted in a
|
|
* call-specific context.
|
|
* Imported VCF headers are appended to the metadata already in a variant set.
|
|
*/
|
|
await gapi.client.variants.import({
|
|
});
|
|
/**
|
|
* Merges the given variants with existing variants.
|
|
*
|
|
* For the definitions of variants and other genomics resources, see
|
|
* [Fundamentals of Google
|
|
* Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
|
|
*
|
|
* Each variant will be
|
|
* merged with an existing variant that matches its reference sequence,
|
|
* start, end, reference bases, and alternative bases. If no such variant
|
|
* exists, a new one will be created.
|
|
*
|
|
* When variants are merged, the call information from the new variant
|
|
* is added to the existing variant. Variant info fields are merged as
|
|
* specified in the
|
|
* infoMergeConfig
|
|
* field of the MergeVariantsRequest.
|
|
*
|
|
* Please exercise caution when using this method! It is easy to introduce
|
|
* mistakes in existing variants and difficult to back out of them. For
|
|
* example,
|
|
* suppose you were trying to merge a new variant with an existing one and
|
|
* both
|
|
* variants contain calls that belong to callsets with the same callset ID.
|
|
*
|
|
* // Existing variant - irrelevant fields trimmed for clarity
|
|
* {
|
|
* "variantSetId": "10473108253681171589",
|
|
* "referenceName": "1",
|
|
* "start": "10582",
|
|
* "referenceBases": "G",
|
|
* "alternateBases": [
|
|
* "A"
|
|
* ],
|
|
* "calls": [
|
|
* {
|
|
* "callSetId": "10473108253681171589-0",
|
|
* "callSetName": "CALLSET0",
|
|
* "genotype": [
|
|
* 0,
|
|
* 1
|
|
* ],
|
|
* }
|
|
* ]
|
|
* }
|
|
*
|
|
* // New variant with conflicting call information
|
|
* {
|
|
* "variantSetId": "10473108253681171589",
|
|
* "referenceName": "1",
|
|
* "start": "10582",
|
|
* "referenceBases": "G",
|
|
* "alternateBases": [
|
|
* "A"
|
|
* ],
|
|
* "calls": [
|
|
* {
|
|
* "callSetId": "10473108253681171589-0",
|
|
* "callSetName": "CALLSET0",
|
|
* "genotype": [
|
|
* 1,
|
|
* 1
|
|
* ],
|
|
* }
|
|
* ]
|
|
* }
|
|
*
|
|
* The resulting merged variant would overwrite the existing calls with those
|
|
* from the new variant:
|
|
*
|
|
* {
|
|
* "variantSetId": "10473108253681171589",
|
|
* "referenceName": "1",
|
|
* "start": "10582",
|
|
* "referenceBases": "G",
|
|
* "alternateBases": [
|
|
* "A"
|
|
* ],
|
|
* "calls": [
|
|
* {
|
|
* "callSetId": "10473108253681171589-0",
|
|
* "callSetName": "CALLSET0",
|
|
* "genotype": [
|
|
* 1,
|
|
* 1
|
|
* ],
|
|
* }
|
|
* ]
|
|
* }
|
|
*
|
|
* This may be the desired outcome, but it is up to the user to determine if
|
|
* if that is indeed the case.
|
|
*/
|
|
await gapi.client.variants.merge({
|
|
});
|
|
/**
|
|
* Updates a variant.
|
|
*
|
|
* For the definitions of variants and other genomics resources, see
|
|
* [Fundamentals of Google
|
|
* Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
|
|
*
|
|
* This method supports patch semantics. Returns the modified variant without
|
|
* its calls.
|
|
*/
|
|
await gapi.client.variants.patch({
|
|
updateMask: "updateMask",
|
|
variantId: "variantId",
|
|
});
|
|
/**
|
|
* Gets a list of variants matching the criteria.
|
|
*
|
|
* For the definitions of variants and other genomics resources, see
|
|
* [Fundamentals of Google
|
|
* Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
|
|
*
|
|
* Implements
|
|
* [GlobalAllianceApi.searchVariants](https://github.com/ga4gh/schemas/blob/v0.5.1/src/main/resources/avro/variantmethods.avdl#L126).
|
|
*/
|
|
await gapi.client.variants.search({
|
|
});
|
|
/**
|
|
* Creates a new variant set.
|
|
*
|
|
* For the definitions of variant sets and other genomics resources, see
|
|
* [Fundamentals of Google
|
|
* Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
|
|
*
|
|
* The provided variant set must have a valid `datasetId` set - all other
|
|
* fields are optional. Note that the `id` field will be ignored, as this is
|
|
* assigned by the server.
|
|
*/
|
|
await gapi.client.variantsets.create({
|
|
});
|
|
/**
|
|
* Deletes a variant set including all variants, call sets, and calls within.
|
|
* This is not reversible.
|
|
*
|
|
* For the definitions of variant sets and other genomics resources, see
|
|
* [Fundamentals of Google
|
|
* Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
|
|
*/
|
|
await gapi.client.variantsets.delete({
|
|
variantSetId: "variantSetId",
|
|
});
|
|
/**
|
|
* Exports variant set data to an external destination.
|
|
*
|
|
* For the definitions of variant sets and other genomics resources, see
|
|
* [Fundamentals of Google
|
|
* Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
|
|
*/
|
|
await gapi.client.variantsets.export({
|
|
variantSetId: "variantSetId",
|
|
});
|
|
/**
|
|
* Gets a variant set by ID.
|
|
*
|
|
* For the definitions of variant sets and other genomics resources, see
|
|
* [Fundamentals of Google
|
|
* Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
|
|
*/
|
|
await gapi.client.variantsets.get({
|
|
variantSetId: "variantSetId",
|
|
});
|
|
/**
|
|
* Updates a variant set using patch semantics.
|
|
*
|
|
* For the definitions of variant sets and other genomics resources, see
|
|
* [Fundamentals of Google
|
|
* Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
|
|
*/
|
|
await gapi.client.variantsets.patch({
|
|
updateMask: "updateMask",
|
|
variantSetId: "variantSetId",
|
|
});
|
|
/**
|
|
* Returns a list of all variant sets matching search criteria.
|
|
*
|
|
* For the definitions of variant sets and other genomics resources, see
|
|
* [Fundamentals of Google
|
|
* Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
|
|
*
|
|
* Implements
|
|
* [GlobalAllianceApi.searchVariantSets](https://github.com/ga4gh/schemas/blob/v0.5.1/src/main/resources/avro/variantmethods.avdl#L49).
|
|
*/
|
|
await gapi.client.variantsets.search({
|
|
});
|
|
}
|
|
});
|